The detailed information of tRNA gene sequence


Sequence ID>A171003125
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 411771
End posion on genome 411845
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttctaggcaa
tRNA gene sequence 
GCCGGGGTAGCTCAGCAGGTAGAGCGCCCGGCTGTTAACCGGGCGGTCGAGGGTTCGAGT
CCCTCCCCCGGCGCCt
Downstream region at tRNA end position 
ttttagttgc
Secondary structure (Cloverleaf model)
>A171003125	Asn	GTT
                   a      GCCt ttttagttgc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | | | | |     G
    A       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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