The detailed information of tRNA gene sequence


Sequence ID>A171003128
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 625136
End posion on genome 625223
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaacaggT
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCTAAGGCGGCGGGCTCGAGACCCGTTGTCCAATAAGGACGC
GTGGGTTCAAATCCCACCCCCGGCGTCt
Downstream region at tRNA end position 
ttttattatt
Secondary structure (Cloverleaf model)
>A171003128	Ser	CGA
                   T      GTCt ttttattatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTCCAATAAGGACGC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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