The detailed information of tRNA gene sequence


Sequence ID>A171003129
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 625362
End posion on genome 625437
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attaatgcga
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGTAGGATGCGAGGCTTGGGCCCTCGTGGTCCGGGGTTCAAA
TCCCCGCGGCCCCACCg
Downstream region at tRNA end position 
tttttctaaa
Secondary structure (Cloverleaf model)
>A171003129	Pro	TGG
                   a      ACCg tttttctaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    C       T C T G       C G G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     TGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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