The detailed information of tRNA gene sequence


Sequence ID>A171003132
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 1014841
End posion on genome 1014927
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagagttgat
tRNA gene sequence 
GCCGCGGTCGCCCAGCCCGGTAGGGCGTCGGCCTGCTAAGCCGATGGGGTTAATCCCCGC
GCGGGTTCAAATCCCGCCCGCGGCGCCt
Downstream region at tRNA end position 
catatcataa
Secondary structure (Cloverleaf model)
>A171003132	Ser	GCT
                   t      GCCt catatcataa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    C       C C C G       G C G G G     C
    C       | | | |                 T T
    G       G G G C
      G T A        G     TGGGGTTAATCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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