The detailed information of tRNA gene sequence


Sequence ID>A171003147
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 384257
End posion on genome 384182
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
taattattga
tRNA gene sequence 
GGGCCCGTAGCCTAGCCAGGATTAGGGCGTCGGCCTGCGGAGCCGAAGGTCGGGGGTTCA
AATCCCCCCGGGTCCGtga
Downstream region at tRNA end position 
ccttattact
Secondary structure (Cloverleaf model)
>A171003147	Arg	GCG
                   a      Gtga ccttattact
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  A         T C C G       G G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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