The detailed information of tRNA gene sequence


Sequence ID>A171003231
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 392614
End posion on genome 392699
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataacgcct
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGGGGAAACCCCGCG
CGGGTTCAAATCCCGCCCCCGGCGCCt
Downstream region at tRNA end position 
attttttatt
Secondary structure (Cloverleaf model)
>A171003231	Ser	GCT
                   t      GCCt attttttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G C G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGGGAAACCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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