The detailed information of tRNA gene sequence


Sequence ID>A171003258
Genome IDCP003534
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus sp. ST04 [CP003534]
Start position on genome 283063
End posion on genome 283140
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tctaattggt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGTATGAGCGCCGCCCTTGCAAGGCGGAGGCCCCGGGTTCAA
ATCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
cgaagagatg
Secondary structure (Cloverleaf model)
>A171003258	Ala	TGC
                   t      ACCA cgaagagatg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T A T          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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