The detailed information of tRNA gene sequence


Sequence ID>A171003281
Genome IDCP003534
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus sp. ST04 [CP003534]
Start position on genome 1511549
End posion on genome 1511464
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggtgggat
tRNA gene sequence 
GCCGGGATAGCCCAGCCTGGTAGGGCGCGGGCCTTGAGAGCCCGTGGGCGTTGCCCGCCG
GGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position 
gaacatcctt
Secondary structure (Cloverleaf model)
>A171003281	Ser	TGA
                   t      GCCA gaacatcctt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C C C G       C G G G G     C
    T       | | | |                 T T
    G       G G G C
      G T A        G     TGGGCGTTGCCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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