The detailed information of tRNA gene sequence


Sequence ID>A171003316
Genome IDCP003651
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus cleftensis CL1 [CP003651]
Start position on genome 1305290
End posion on genome 1305367
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttatgggcct
tRNA gene sequence 
GGGCCGGTGGCTTAGCCAGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCGCGGGTTCGA
ATCCCGCCCGGCCCGCCA
Downstream region at tRNA end position 
gttacaaact
Secondary structure (Cloverleaf model)
>A171003316	Arg	CCG
                   t      GCCA gttacaaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  A         T T C G       G C G G G     C
  G         + | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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