The detailed information of tRNA gene sequence


Sequence ID>A171003392
Genome IDCP003842
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus koreensis AR1 [CP003842]
Start position on genome 236806
End posion on genome 236878
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctaatatgtg
tRNA gene sequence 
GCCTTCGTAGTACAGTGGTTAGTATAGAGGATTGTGGATCCTCGGACAGGAGTTCGATTC
CCCTCGAGGGCCCgc
Downstream region at tRNA end position 
ttaattattt
Secondary structure (Cloverleaf model)
>A171003392	His	GTG
                   g      CCgc ttaattattt
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | |   |     G
    G       C A T G       A G G A G     C
    G       | | | +                 T T
    T       G T A T
      T A          A     GGAC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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