The detailed information of tRNA gene sequence


Sequence ID>A171003402
Genome IDCP003842
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus koreensis AR1 [CP003842]
Start position on genome 1313672
End posion on genome 1313599
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acccaaacgt
tRNA gene sequence 
GCCTTGGTAGCTCAGCCTGGTAGAGCGAACGCCTCGTAAGCGTTAGGTCGCGGGTTCAGA
TCCCGTCCGAGGCTtgt
Downstream region at tRNA end position 
aatttttttc
Secondary structure (Cloverleaf model)
>A171003402	Thr	CGT
                   t      Ttgt aatttttttc
                     G - C
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C
                     G - C          T A
                    T     T G C C C     G
      C G A        A      + | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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