The detailed information of tRNA gene sequence


Sequence ID>A171003410
Genome IDCP003842
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus koreensis AR1 [CP003842]
Start position on genome 24630
End posion on genome 24557
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
catggctcaa
tRNA gene sequence 
GCGGAGTTAGTTTAGTCTGGTATGACGTCAGCTTCCCAAGCTGAAGGCCGCGGGTTCAAA
TCCCGCACTCCGCAtca
Downstream region at tRNA end position 
aatttctcta
Secondary structure (Cloverleaf model)
>A171003410	Gly	CCC
                   a      Atca aatttctcta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        A      | | | | |     A
    C       T T T G       G C G G G     C
    T         + | |                 T T
    G       T G A C
      G T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.-

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