The detailed information of tRNA gene sequence


Sequence ID>A171003414
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 197674
End posion on genome 197748
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctgattaatt
tRNA gene sequence 
GGGCCGGTCGTCTAGTCCGGTAGGATAGGTGCATGGCATGCATCGGATCGAGGGTTCAAA
TCCCTTCCGGTCCACtt
Downstream region at tRNA end position 
atctttttat
Secondary structure (Cloverleaf model)
>A171003414	Ala	GGC
                   t      ACtt atctttttat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    C       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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