The detailed information of tRNA gene sequence


Sequence ID>A171003417
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 258739
End posion on genome 258826
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aaatttcttt
tRNA gene sequence 
GCGGACGTCGCCCAGCCTGGCCAAAGGCGCTAGCTTGAGGGGCTAGTCTCTCAGGAGTTC
GTGGGTTCAAATCCCATCGTCCGCACCA
Downstream region at tRNA end position 
ctgattttca
Secondary structure (Cloverleaf model)
>A171003417	Leu	GAG
                   t      ACCA ctgattttca
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C C G A        C      + | | | |     A
  T         C C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCTCTCAGGAGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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