The detailed information of tRNA gene sequence


Sequence ID>A171003418
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 474204
End posion on genome 474280
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
caaacttttt
tRNA gene sequence 
GGACTCGTTGCATAGCTTGGATAGTGCGATTGCTTGCGGAGCAATAGGTCGCCGGTTCGA
ATCCGGTCGGGTCCGCCt
Downstream region at tRNA end position 
ttctcacgtt
Secondary structure (Cloverleaf model)
>A171003418	Arg	GCG
                   t      GCCt ttctcacgtt
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G G C C     A
    T C G A        T      + | | | |     G
  T         T A C G       G C C G G     C
  G         + | | |                 T T
  G         G T G C
    A T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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