The detailed information of tRNA gene sequence


Sequence ID>A171003538
Genome IDCP004049
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomethylophilus alvi Mx1201 [CP004049]
Start position on genome 1062103
End posion on genome 1062028
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gggttagttt
tRNA gene sequence 
GGGCCCATAGCTTAGATTGGCTGGAGCGTCCGACTGATAATCGGAAGGTCGAGAGTTCAA
ATCTCTCTGGGCCCACta
Downstream region at tRNA end position 
ctaacttgtt
Secondary structure (Cloverleaf model)
>A171003538	Ile	GAT
                   t      ACta ctaacttgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
    T A G A        A      | | | | |     A
  T         T T C G       G A G A G     C
  G         + | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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