The detailed information of tRNA gene sequence


Sequence ID>A171003546
Genome IDCP004049
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomethylophilus alvi Mx1201 [CP004049]
Start position on genome 214592
End posion on genome 214519
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggcaactgc
tRNA gene sequence 
GGACTCATGGTCTAGGGGTTATGACGTCGCCTTCACACGGCGGAGGTCGCCGGTTCAAAT
CCGGCTGGGTCCACtt
Downstream region at tRNA end position 
gattattcta
Secondary structure (Cloverleaf model)
>A171003546	Val	CAC
                   c      ACtt gattattcta
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      G G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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