The detailed information of tRNA gene sequence


Sequence ID>A171003564
Genome IDCP004050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter sp. AbM4 [CP004050]
Start position on genome 1867208
End posion on genome 1867133
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttatat
tRNA gene sequence 
AGCAGGGTGGGGTAGTCTGGTGATCCCGCGGGGCTCATAACCCCGAGAGCCCTAGTTCAA
ATCTAGGCCCTGCTACtt
Downstream region at tRNA end position 
ttttatttgg
Secondary structure (Cloverleaf model)
>A171003564	Met	CAT
                   t      ACtt ttttatttgg
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     G G A T C     A
    C T G A        G      | | | | |     A
  T         T G G G       C C T A G     C
  G           | | |                 T T
  G         T C C C
    T G A          G     AGAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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