The detailed information of tRNA gene sequence


Sequence ID>A171003612
Genome IDCP004144
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina mazei Tuc01 [CP004144]
Start position on genome 277606
End posion on genome 277532
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcagcaaact
tRNA gene sequence 
GGGCTCGTGGTCTAGTCGGTTATGACATCGCCTTTACACGGCGGGGATCCTGAGTTCGAA
TCTCAGCGGGCCCACtt
Downstream region at tRNA end position 
tttttctctc
Secondary structure (Cloverleaf model)
>A171003612	Val	TAC
                   t      ACtt tttttctctc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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