The detailed information of tRNA gene sequence


Sequence ID>A171003641
Genome IDCP004145
Search identical group
Phylum/ClassUnclassified
SpeciesFerroplasma acidarmanus Fer1 [CP004145]
Start position on genome 624622
End posion on genome 624548
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacggcgttt
tRNA gene sequence 
GGGGTTGTAGCTCAGCTAGGTAGAGCGCCTGGCTCATAACCAGGTGGTCGTCGGTTCAAA
CCCGGCCAGCCCCACtg
Downstream region at tRNA end position 
aacatatttt
Secondary structure (Cloverleaf model)
>A171003641	Met	CAT
                   t      ACtg aacatatttt
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          C A
                    T     C G G C C     A
      C G A        A      | + | | |     A
    T       C T C G       G T C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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