The detailed information of tRNA gene sequence


Sequence ID>A171003695
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 423522
End posion on genome 423597
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctagatacat
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGATATCCCGTCGGGCTCATAACCCGGAGACCGGTCGTTCAA
ATCGACTCCCCGCTACtt
Downstream region at tRNA end position 
ttcttaattc
Secondary structure (Cloverleaf model)
>A171003695	Met	CAT
                   t      ACtt ttcttaattc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A G C     A
    C C G A        A      + | | | |     A
  A         T G G G       G G T C G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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