The detailed information of tRNA gene sequence


Sequence ID>A171003699
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 786206
End posion on genome 786283
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aatttttaat
tRNA gene sequence 
GCACACGTGGTCTAGCTTGGATATGGCGGTGGCCTCCTAAGCCACATATCGAGGGTTCGA
ATCCCCCCGTGTGCGCCA
Downstream region at tRNA end position 
ctattcttgt
Secondary structure (Cloverleaf model)
>A171003699	Arg	CCT
                   t      GCCA ctattcttgt
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C C C C C     A
    T C G A        G      |   | | |     G
  T         T C T G       G A G G G     C
  G           | + |                 T T
  G         T G G C
    A T A          G     ATATC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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