The detailed information of tRNA gene sequence


Sequence ID>A171003702
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 1480441
End posion on genome 1480525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggagctaa
tRNA gene sequence 
GCGGAGGTGGCCCAGCCCGGCAAGGCGTTGGATTGCTAATCCAATGTCCGCAAGGACTCG
GGGGTTCAAATCCCTCCCTTCGCGCtt
Downstream region at tRNA end position 
tatttttcaa
Secondary structure (Cloverleaf model)
>A171003702	Ser	GCT
                   a      GCtt tatttttcaa
                     G - C
                     C - G
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    C       C C C G       G G G G G     C
    C         | | |                 T T
    G       A G G C
      G C A        G     TGTCCGCAAGGACTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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