The detailed information of tRNA gene sequence


Sequence ID>A171003705
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 1700369
End posion on genome 1700442
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggaatgataa
tRNA gene sequence 
GGGCTCATGGTCTAGCGGTTATGACGTCTCCTTCACACGGAGAAGATCGCCAGTTCGAAT
CTGGCTGAGCCCACtt
Downstream region at tRNA end position 
tatgtttttt
Secondary structure (Cloverleaf model)
>A171003705	Val	CAC
                   a      ACtt tatgtttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G T C     A
      C G A        G      | | | | |     G
    G       T C T G       G C C A G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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