The detailed information of tRNA gene sequence


Sequence ID>A171003731
Genome IDCP005962
Search identical group
Phylum/ClassEuryarchaeota
SpeciesSalinarchaeum sp. Harcht-Bsk1 [CP005962]
Start position on genome 2411168
End posion on genome 2411241
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgaccgcga
tRNA gene sequence 
GGGCCAATAGCTCAATCAGGTTGAGCGCTCGGCTGATAACCGGGAGGTTCTCGGTTCAAA
TCCGAGTTGGCCCAtgt
Downstream region at tRNA end position 
tttccgcgaa
Secondary structure (Cloverleaf model)
>A171003731	Ile	GAT
                   a      Atgt tttccgcgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G A G C C     A
      T A A        A      | | | | |     A
    C       C T C G       C T C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGTT
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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