The detailed information of tRNA gene sequence


Sequence ID>A171003778
Genome IDCP006019
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPalaeococcus pacificus DY20341 [CP006019]
Start position on genome 1139360
End posion on genome 1139446
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgagcaggc
tRNA gene sequence 
GCCGGGGTAGCCTAGCTCGGGAAGGCGGTGGACTCGAGATCCACTGGGCGTTCGCCCGCC
AGGGTTCAAATCCCTGCCCCGGCGCCA
Downstream region at tRNA end position 
ttaatgccga
Secondary structure (Cloverleaf model)
>A171003778	Ser	CGA
                   c      GCCA ttaatgccga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    T       T C C G       C A G G G     C
    C       | | | |                 T T
    G       A G G C
      G G A        G     TGGGCGTTCGCCCGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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