The detailed information of tRNA gene sequence


Sequence ID>A171003790
Genome IDCP006019
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPalaeococcus pacificus DY20341 [CP006019]
Start position on genome 1247536
End posion on genome 1247450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggacacgt
tRNA gene sequence 
GCCGCGGTAGCCTAGCTTGGTATGGCGCCGGCCTGCTAAGCCGGTGGGCGTGGTCCCTCA
GGGGTTCAAATCCCCTCCGCGGCGCCA
Downstream region at tRNA end position 
aaattctctt
Secondary structure (Cloverleaf model)
>A171003790	Ser	GCT
                   t      GCCA aaattctctt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       T C C G       A G G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TGGGCGTGGTCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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