The detailed information of tRNA gene sequence


Sequence ID>A171003868
Genome IDCP006670
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis DSM 5473 [CP006670]
Start position on genome 462130
End posion on genome 462207
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ttcttgggtt
tRNA gene sequence 
GCCCCGGTGGCCTAGTCTGGATAGGGCGCGAGGCTGCGGACCTCGAGGTCCGGGGTTCAA
ATCCCCGCCGGGGCGCCA
Downstream region at tRNA end position 
catcttattc
Secondary structure (Cloverleaf model)
>A171003868	Arg	GCG
                   t      GCCA catcttattc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C T G A        G      | | | | |     A
  T         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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