The detailed information of tRNA gene sequence


Sequence ID>A171003885
Genome IDCP006670
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis DSM 5473 [CP006670]
Start position on genome 2040346
End posion on genome 2040270
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaatcgggat
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGGAGAGCGACGGCTTCGCAAGCCGTAGGCCGCGGGTTCAAA
TCCCGCCCGGTCCACCA
Downstream region at tRNA end position 
ctatctttct
Secondary structure (Cloverleaf model)
>A171003885	Ala	CGC
                   t      ACCA ctatctttct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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