The detailed information of tRNA gene sequence


Sequence ID>A171003887
Genome IDCP006670
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis DSM 5473 [CP006670]
Start position on genome 1681949
End posion on genome 1681872
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ccgggcttgt
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGCCTAGGACAGCGGCCTGCCACGCCGCGGGCCCGGGTTCAA
ATCCCGGCCACCGCACCA
Downstream region at tRNA end position 
caaaccaatt
Secondary structure (Cloverleaf model)
>A171003887	Gly	GCC
                   t      ACCA caaaccaatt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     GGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.-

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