The detailed information of tRNA gene sequence


Sequence ID>A171003916
Genome IDCP006867
Search identical group
Phylum/ClassThermoproteota
SpeciesIgnicoccus islandicus DSM 13165 [CP006867]
Start position on genome 642233
End posion on genome 642320
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatccctgga
tRNA gene sequence 
GCCGGGGTCGCCTAGCCTGGTTAGGGCGCCGGCCTGCTAAGCCGGTGGGGGAAACCCCGC
GCGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
tccgttctct
Secondary structure (Cloverleaf model)
>A171003916	Ser	GCT
                   a      GCCA tccgttctct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  T         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    T T A          G     TGGGGGAAACCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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