The detailed information of tRNA gene sequence


Sequence ID>A171004006
Genome IDCP006933
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium formicicum BRM9 [CP006933]
Start position on genome 2117735
End posion on genome 2117651
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taactcatta
tRNA gene sequence 
GCCGGGATAGCCTAGCCAGGTAAGGCGCGGGACTTGAGATCCCGTGGAGCATGGCTCCTC
CAGGGTTCAAATCCCTGTCCCGGCGtat
Downstream region at tRNA end position 
cataaattta
Secondary structure (Cloverleaf model)
>A171004006	Ser	TGA
                   a      Gtat cataaattta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C A G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGAGCATGGCTCCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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