The detailed information of tRNA gene sequence


Sequence ID>A171004017
Genome IDCP006933
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium formicicum BRM9 [CP006933]
Start position on genome 339444
End posion on genome 339371
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcgctaaa
tRNA gene sequence 
GGGCCCATAGCTTAGCCAGGTAGAGCGCCCGGCTCATAACCGGGCGGCCATGGGTTCGAA
CCCCATTGGGCCCAttt
Downstream region at tRNA end position 
acctattcaa
Secondary structure (Cloverleaf model)
>A171004017	Met	CAT
                   a      Attt acctattcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    C       T T C G       A T G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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