The detailed information of tRNA gene sequence


Sequence ID>A171004052
Genome IDCP006965
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus paralvinellae ES1 [CP006965]
Start position on genome 1865578
End posion on genome 1865501
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ccctaagcga
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGTCAGAGCACCGGGCTTTTAACCCGGTGGTCGCGGGTTCGA
ATCCCGCCCGGCCCGCCA
Downstream region at tRNA end position 
acaaactttt
Secondary structure (Cloverleaf model)
>A171004052	Lys	TTT
                   a      GCCA acaaactttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          A     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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