The detailed information of tRNA gene sequence


Sequence ID>A171004162
Genome IDCP007055
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalostagnicola larsenii XH-48 [CP007055]
Start position on genome 88534
End posion on genome 88461
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatgcagggt
tRNA gene sequence 
GCCCGGGTGGTGTAGTGGCCCATCATACAACCCTGTCACGGTTGTGACGCGGGTTCAAAT
CCCGCCTCGGGCGCtt
Downstream region at tRNA end position 
tctcacaatt
Secondary structure (Cloverleaf model)
>A171004162	Asp	GTC
                   t      GCtt tctcacaatt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       T G T G       G C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        A     TGAC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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