The detailed information of tRNA gene sequence


Sequence ID>A171004178
Genome IDCP007060
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium sp. DL1 [CP007060]
Start position on genome 1954787
End posion on genome 1954874
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
acgaacgcgT
tRNA gene sequence 
GCGAGGGTAGCCAAGCTCGGCCAACGGCGACGGACTCAAGATCCGTTCTCGTAGGAGTTC
GAGGGTTCGAATCCCTTCCCTCGCATCg
Downstream region at tRNA end position 
ccggcacacg
Secondary structure (Cloverleaf model)
>A171004178	Leu	CAA
                   T      ATCg ccggcacacg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T C G A        A      + | | | |     G
  C         A C C G       G A G G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCTCGTAGGAGTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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