The detailed information of tRNA gene sequence


Sequence ID>A171004203
Genome IDCP007140
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus guaymasensis DSM 11113 [CP007140]
Start position on genome 344949
End posion on genome 345034
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcatgggagt
tRNA gene sequence 
GCCGCGGTAGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGGCGGTGCCCACCG
GGGTTCAAATCCCCGCCGCGGCGCCA
Downstream region at tRNA end position 
ttaacttctc
Secondary structure (Cloverleaf model)
>A171004203	Ser	GCT
                   t      GCCA ttaacttctc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGGCGGTGCCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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