The detailed information of tRNA gene sequence


Sequence ID>A171004213
Genome IDCP007140
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus guaymasensis DSM 11113 [CP007140]
Start position on genome 886476
End posion on genome 886553
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaccggaagt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGTACGAGCGCCGCCCTCGCAAGGCGGAGGCCGCGGGTTCAA
ATCCCGCCCGGTCCACCA
Downstream region at tRNA end position 
catttctgct
Secondary structure (Cloverleaf model)
>A171004213	Ala	CGC
                   t      ACCA catttctgct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T A C          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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