The detailed information of tRNA gene sequence


Sequence ID>A171004255
Genome IDCP007174
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera evergladensis SR1 [CP007174]
Start position on genome 1870367
End posion on genome 1870443
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgataaggtt
tRNA gene sequence 
GGGCCGGTCGTCTAGTCCGGTAGGATACGGCATTGGCATTGCTGAGGTCGTGGGTTCAAA
TCCCACCCGGTCCACCA
Downstream region at tRNA end position 
ttttacattt
Secondary structure (Cloverleaf model)
>A171004255	Ala	GGC
                   t      ACCA ttttacattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    C       T C T G       G T G G G     C
    C       + | | +                 T T
    G       G G A T
      G T A        A     AGGTC
                    C - G
                    G + T
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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