The detailed information of tRNA gene sequence


Sequence ID>A171004258
Genome IDCP007174
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera evergladensis SR1 [CP007174]
Start position on genome 2079162
End posion on genome 2079087
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcacgtacgc
tRNA gene sequence 
GGGCCCATAGCTCAGCCTGGTTAGAGCGACCGGCTCATAACCGGTCGGCCAAGGGTTCGA
ATCCCTTTGGGCCCACtt
Downstream region at tRNA end position 
acatttcggg
Secondary structure (Cloverleaf model)
>A171004258	Met	CAT
                   c      ACtt acatttcggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       A A G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     CGGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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