The detailed information of tRNA gene sequence


Sequence ID>A171004259
Genome IDCP007174
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrososphaera evergladensis SR1 [CP007174]
Start position on genome 2025797
End posion on genome 2025720
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgcatacggt
tRNA gene sequence 
GGATGGGTGGTCTAGCCTGGTTAGGATACCTGTCTCACACACAGGTGGTCGAGAGTTCGA
ATCTCTCCCCATCCACCA
Downstream region at tRNA end position 
tcttactttg
Secondary structure (Cloverleaf model)
>A171004259	Val	CAC
                   t      ACCA tcttactttg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
    C C G A        G      | | | | |     G
  T         T C T G       G A G A G     C
  G         + | | +                 T T
  G         G G A T
    T T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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