The detailed information of tRNA gene sequence


Sequence ID>A171004329
Genome IDCP007536
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrososphaera viennensis EN76 [CP007536]
Start position on genome 2292352
End posion on genome 2292426
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgcagtctgc
tRNA gene sequence 
GGGGTCGTTGTCTAGCTTGGTTAGGATGCCAGCCTTGGGCGCTGGAGGTCGCTGGTTCGA
ATCCGGCCGACCCCAttt
Downstream region at tRNA end position 
ttctgcttga
Secondary structure (Cloverleaf model)
>A171004329	Pro	TGG
                   c      Attt ttctgcttga
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
    T C G A        T      | | + | |     G
  T         T C T G       G C T G G     C
  G         + | | +                 T T
  G         G G A T
    T T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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