The detailed information of tRNA gene sequence


Sequence ID>A171004447
Genome IDCP008887
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus eurythermalis A501 [CP008887]
Start position on genome 1035806
End posion on genome 1035883
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acctaccgct
tRNA gene sequence 
GGGGCCGTAGGGTAGCTTGGCCCATCCTGCGGGCTTTGGGAGCCCGTGACCCGGGTTCAA
ATCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
caagaaactt
Secondary structure (Cloverleaf model)
>A171004447	Pro	TGG
                   t      ACCA caagaaactt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    C C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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