The detailed information of tRNA gene sequence


Sequence ID>A171004476
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1193873
End posion on genome 1193947
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggtttggaga
tRNA gene sequence 
GCCGGGGTAGTCTAGGGGCTAGGCAGCGGACTGCAGATCCGCCTTACGTGGGTTCAAATC
CCACCCCCGGCTCCA
Downstream region at tRNA end position 
tttgaaactt
Secondary structure (Cloverleaf model)
>A171004476	Cys	GCA
                   a      TCCA tttgaaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     A
      G     T C T G       G T G G G     C
      G     | | + |                 T T
      G     A G G C
        C T        A     CTTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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