The detailed information of tRNA gene sequence


Sequence ID>A171004482
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1575098
End posion on genome 1575010
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgttttaga
tRNA gene sequence 
GCGGAGGTAGCCTAGCCCGGCCAAGGCGTGGGACTGGAGATCCCATGGGGCTTTGCCCCG
CGGGGGTTCAAATCCCCCCCTCCGCGCCA
Downstream region at tRNA end position 
cttatttttt
Secondary structure (Cloverleaf model)
>A171004482	Ser	GGA
                   a      GCCA cttatttttt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  C         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGGGGCTTTGCCCCGC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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