The detailed information of tRNA gene sequence


Sequence ID>A171004487
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1289777
End posion on genome 1289688
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctgttttgt
tRNA gene sequence 
GCAGGGGTAGCCAAGCCAGGACTACGGCGCTGGACTTGAGATCCAGTGGGGCTTTGCCCC
GCCTGGGTTCAAATCCCAGCCCCTGCGCCA
Downstream region at tRNA end position 
taattccaaa
Secondary structure (Cloverleaf model)
>A171004487	Ser	TGA
                   t      GCCA taattccaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C C G A        A      | | | | |     A
  A         A C C G       C T G G G     C
  G           | | |                 T T
  G         C G G C
    A C T A        G     TGGGGCTTTGCCCCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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