The detailed information of tRNA gene sequence


Sequence ID>A171004497
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1176942
End posion on genome 1176865
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtccgatat
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTCAGAGCGCTCGGCTCATAACCGAGTGGTCAAGGGTTCAA
ATCCCTTCGGGCCCACCA
Downstream region at tRNA end position 
tataaaatca
Secondary structure (Cloverleaf model)
>A171004497	Met	CAT
                   t      ACCA tataaaatca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       A A G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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