The detailed information of tRNA gene sequence


Sequence ID>A171004500
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1174819
End posion on genome 1174746
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagggaaagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGGAGAGCGCCGGCCTTGCAAGCCGGAGGCCGTGGGTTCAAAT
CCCACCGGGTCCACta
Downstream region at tRNA end position 
tatatgcaac
Secondary structure (Cloverleaf model)
>A171004500	Ala	TGC
                   t      ACta tatatgcaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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