The detailed information of tRNA gene sequence


Sequence ID>A171004531
Genome IDCP009501
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina thermophila TM-1 [CP009501]
Start position on genome 2512477
End posion on genome 2512403
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttcaattcat
tRNA gene sequence 
GGGCTCGTGGTCTAGATGGTTATGACGTCGCCTTCACACGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGGGCCCACtc
Downstream region at tRNA end position 
tgatttttat
Secondary structure (Cloverleaf model)
>A171004531	Val	CAC
                   t      ACtc tgatttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      A G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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