The detailed information of tRNA gene sequence


Sequence ID>A171004540
Genome IDCP009501
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina thermophila TM-1 [CP009501]
Start position on genome 1873224
End posion on genome 1873138
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatcctttgT
tRNA gene sequence 
GACGAGATAGCCAAGCCCGGTATGGCGCGGGATTGCTAATCCCGTGATGCTTTGCATCTC
GGGGGTTCGAATCCCCCTCTCGTCGTtc
Downstream region at tRNA end position 
tctttttcaa
Secondary structure (Cloverleaf model)
>A171004540	Ser	GCT
                   T      GTtc tctttttcaa
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGATGCTTTGCATCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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